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28 stars written in Shell
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Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Shell 109,340 22,853 Updated Oct 22, 2024

z - jump around

Shell 16,443 1,170 Updated Jun 19, 2024

▁▂▃▅▂▇ in your shell.

Shell 6,013 290 Updated May 7, 2022

letsencrypt/acme client implemented as a shell-script – just add water

Shell 5,988 716 Updated Aug 12, 2024

A heads up display for git

Shell 2,591 85 Updated Aug 31, 2020

An easier way to update the firmware of your Raspberry Pi

Shell 1,941 233 Updated Feb 6, 2023

A slightly better history for zsh

Shell 1,288 75 Updated Apr 27, 2024

MySQL Dump splitter to split / extract databases & tables from mysqldump

Shell 517 133 Updated Jul 27, 2023

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

Shell 404 190 Updated Jul 28, 2023

A collection of patch sets for rvm to allow easy installation of my MRI patches for various ruby versions

Shell 308 26 Updated Oct 4, 2024

[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome

Shell 296 68 Updated Dec 14, 2024

upload big files to Zenodo using cURL, jq and bash

Shell 240 39 Updated Jul 26, 2024

A user-friendly workflow for phylogenomics

Shell 204 26 Updated Oct 10, 2024

Docker images for fastai

Shell 174 41 Updated Apr 22, 2022

A simple Snakemake profile for Slurm without --cluster-config

Shell 145 18 Updated Jun 20, 2024

Alignment viewer for linux terminal

Shell 116 7 Updated Aug 24, 2024

Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing

Shell 111 38 Updated May 12, 2024

A pipeline to generate a phylogenetic tree from huge SNP data

Shell 86 37 Updated Dec 30, 2023

r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)

Shell 63 17 Updated Dec 21, 2023

A handbook for those who want to start coordinating Hacky Hour events in their University/Institute

Shell 45 14 Updated Nov 23, 2020

An easy way to run BioNano genomic analysis

Shell 27 7 Updated Apr 9, 2021

akutils with massive updates over v1.1 to functionality and command line interface.

Shell 15 8 Updated Jun 25, 2019

Inquiline comparative genomics project

Shell 9 4 Updated Mar 16, 2021

Anything related to GenSel program from Iowa State

Shell 8 5 Updated Aug 31, 2018

Files used for instantiating multiple VMs on the Australian NeCTAR Reseach Cloud for the purpose of running hands-on training workshops. It is also possible to generate NX Session files making the …

Shell 3 4 Updated Nov 9, 2014

This is the basic SLURM job files necessary to run GOMAP on various HPC clusters

Shell 2 1 Updated Sep 27, 2019

This repository stores some useful pipelines used in Pawsey

Shell 2 Updated Oct 26, 2016

Configure and install group-wide software modules on Raijin using ansible

Shell 1 Updated Nov 20, 2018