Biological foundation modeling from molecular to genome scale

CRISPSR-GPT LLM Agent Public Welcome Page

PLM based active learning model for protein engineering

Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch

Find your vector friends with Weaviate Vector Search!

AI-generated gene editing systems

Conversational RPA SDK for Chatbot Makers. Join our Discord: https://discord.gg/7q8NBZbQzt

R functions underlying ExpressAnalyst

Grok open release

A Transcriptomics-Proteomics Integration Pipeline

Multi-Omics Factor Analysis

Deep Learning System core principles introduction.

QIIME 2中文文档(QIIME 2 Chinese Manual)

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

Repository for collective design of an iGEM DNA distribution

Pretrained language model and its related optimization techniques developed by Huawei Noah's Ark Lab.

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

Knowledge distillation on DNABERT (DistilBERT and MiniLM techniques) for promoter identification.

An integrated database for improving taxonomic classification of 16S Ribosomal RNA sequences.

A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.

Metabolic Engineering Workbench

The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.

Python library for hAndling metaData of METabolism.

A library for transfer learning by reusing parts of TensorFlow models.

Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development