Resources for bioinformatics jobs

Common Workflow Language reference implementation

Automatically exported from code.google.com/p/sse2neon

Implementations of SIMD instruction sets for systems which don't natively support them.

A comparison of different Oxford Nanopore basecallers

Python bindings for the parasail C library.

Toolkit for processing sequences in FASTA/Q formats

A standalone and lightweight C library

Pairwise Sequence Alignment Library

NextGenMap is a flexible highly sensitive short read mapping tool that handles much higher mismatch rates than comparable algorithms while still outperforming them in terms of runtime. This allows …

Whole Genome Simulator for Next-Generation Sequencing

spotyXBMC is a fork of XBMC with spotify support

C++ API & command-line toolkit for working with BAM data