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Animated flashcards for Jupyter notebooks and JupyterBook
An interactive Quiz generator for Jupyter notebooks and Jupyter Book
A framework for cryo-EM micrographs using semantic segmentation trained by projection of reconstructed 3D mask.
Tools for High-dimensional, low-sample-size (HDLSS) data.
A particle picking pipeline for cryo-EM micrographs using semantic segmentation trained by projection of reconstructed 3D volume.
A curated list of awesome computational cryo-EM methods.
This repository is a curated list of earthquake prediction models!
A Framework for Orientation Recovery with Uncertainty Measurement in Cryo-EM Image Analysis
A novel energy-aware pathfinding algorithm for searching the most probable conformational changes in cryo-EM data.
Python scripts for easy RELION STAR file manipulation.
The programs of creating cryo-EM particle picking datasets
A curated list of awesome computational cryo-ET methods.
Automatic atomic model building program for cryo-EM maps
TensorFlow Similarity is a python package focused on making similarity learning quick and easy.
Learning to recover orientations from projections in single-particle cryo-EM
R package for dimensionality reduction of small datasets
Algorithms for Single Particle Reconstruction
Image-processing software for cryo-electron microscopy
Minimal and clean examples of machine learning algorithms implementations
Machine Learning From Scratch. Bare bones NumPy implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from linear regression to deep lear…
Extensible, parallel implementations of t-SNE
Implementation of a Bayesian approach to cryo-EM structure determination
A curated list of awesome side-channel attack resources