✂️ Deep learning-based splice site predictor that improves spliced alignments

Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

Accompanying analysis code for the FRASER manuscript

FRASER - Find RAre Splicing Events in RNA-seq

Detecting Aberrant Splicing Events from RNA-sequencing data

Splicing Prediction Pipeline

"Probabilistic Machine Learning" - a book series by Kevin Murphy

sandbox for exotic ensemble learning algorithms

Implementation of the paper "Train Once, Test Anywhere: Zero-Shot Learning for Text Classification"

Collections of my implementations on "basic" data analytics exercises

Implementation of Segnet, FCN, UNet , PSPNet and other models in Keras.

This module organizes the source codes from DeepLearning.AI TensorFlow Developer Specialization for future reuse

A demo for predicting patient health status via diagnosis and prescription drugs. Key methods: (simple) EHR-sequencing, NLP, classification algorithms (e.g. logistic regression, decision tree)

lecture notes of "Matrix Methods in Data Analysis, Signal Processing, and Machine Learning"

The official code repository for examples in the O'Reilly book 'Generative Deep Learning'

Foundations of Machine Learning

Notebooks about Bayesian methods for machine learning

TensorNet (TensorFlow implementation)

The Natural Language Decathlon: A Multitask Challenge for NLP

Neural Collaborative Filtering

A collection of machine learning examples and tutorials.

Train Spacy ner with custom dataset

PyKnow: Expert Systems for Python

The PSL software from the University of Maryland and the University of California Santa Cruz

Seamless operability between C++11 and Python

sentence embedding by Smooth Inverse Frequency weighting scheme

Text Similarity

Python Matrix Factorization Module

This repository holds all the code for the site http://www.adventuresinmachinelearning.com

A list of deep learning implementations in biology