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FIX: structure annotation fixes
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@pszgaspar
pszgaspar committed Jun 3, 2024
1 parent c7b90fb commit 1c55ac3
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Showing 11 changed files with 24 additions and 15 deletions.
Binary file modified structure_data/annotation/GPCRdb_structure_info.xlsx
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30 changes: 15 additions & 15 deletions structure_data/annotation/mod_xtal_segends.yaml
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Expand Up @@ -27251,7 +27251,7 @@
i2b: 109
i2e: 116
8GTG:
1b: 103
1b: 104
1e: 144
2b: 149
2e: 176
Expand All @@ -27276,7 +27276,7 @@
i2b: '-'
i2e: '-'
8GTI:
1b: 103
1b: 104
1e: 144
2b: 149
2e: 175
Expand All @@ -27301,7 +27301,7 @@
i2b: '-'
i2e: '-'
8GTM:
1b: 103
1b: 104
1e: 144
2b: 149
2e: 175
Expand Down Expand Up @@ -28111,7 +28111,7 @@
4e: 165
5b: 181
5e: 213
6b: 221
6b: 269
6e: 298
7b: 304
7e: 330
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4e: 189
5b: 211
5e: 240
6b: 256
6b: 263
6e: 292
7b: 300
7e: 328
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4b: 146
4e: 172
5b: 196
5e: 280
6b: 328
5e: 229
6b: 330
6e: 365
7b: 371
7e: 394
Expand All @@ -30635,8 +30635,8 @@
4b: 146
4e: 172
5b: 198
5e: 272
6b: 328
5e: 230
6b: 330
6e: 365
7b: 371
7e: 395
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4b: 146
4e: 170
5b: 196
5e: 280
6b: 328
5e: 229
6b: 340
6e: 366
7b: 373
7e: 395
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4e: 189
5b: 208
5e: 240
6b: 256
6b: 263
6e: 292
7b: 297
7e: 329
Expand Down Expand Up @@ -31451,7 +31451,7 @@
i2b: '-'
i2e: '-'
8PWN:
1b: 26
1b: 27
1e: 59
2b: 64
2e: 94
Expand All @@ -31460,7 +31460,7 @@
4b: 142
4e: 167
5b: 198
5e: 321
5e: 233
6b: 340
6e: 380
7b: 387
Expand Down Expand Up @@ -31686,7 +31686,7 @@
4e: 187
5b: 214
5e: 233
6b: 345
6b: 365
6e: 392
7b: 404
7e: 424
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1 change: 1 addition & 0 deletions structure_data/wt_pdb_lookup/8HNN.json
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[{"WT_POS": 255, "PDB_POS": 263, "AA": "R"}, {"WT_POS": 256, "PDB_POS": 264, "AA": "L"}, {"WT_POS": 257, "PDB_POS": 265, "AA": "V"}, {"WT_POS": 258, "PDB_POS": 266, "AA": "V"}, {"WT_POS": 259, "PDB_POS": 267, "AA": "V"}, {"WT_POS": 260, "PDB_POS": 268, "AA": "V"}, {"WT_POS": 261, "PDB_POS": 269, "AA": "V"}, {"WT_POS": 262, "PDB_POS": 270, "AA": "V"}, {"WT_POS": 263, "PDB_POS": 271, "AA": "A"}, {"WT_POS": 264, "PDB_POS": 272, "AA": "F"}, {"WT_POS": 265, "PDB_POS": 273, "AA": "A"}, {"WT_POS": 266, "PDB_POS": 274, "AA": "L"}, {"WT_POS": 267, "PDB_POS": 275, "AA": "C"}, {"WT_POS": 268, "PDB_POS": 276, "AA": "W"}, {"WT_POS": 269, "PDB_POS": 277, "AA": "T"}, {"WT_POS": 270, "PDB_POS": 278, "AA": "P"}, {"WT_POS": 271, "PDB_POS": 279, "AA": "Y"}, {"WT_POS": 272, "PDB_POS": 280, "AA": "H"}, {"WT_POS": 273, "PDB_POS": 281, "AA": "L"}, {"WT_POS": 274, "PDB_POS": 282, "AA": "V"}, {"WT_POS": 275, "PDB_POS": 283, "AA": "V"}, {"WT_POS": 276, "PDB_POS": 284, "AA": "L"}, {"WT_POS": 277, "PDB_POS": 285, "AA": "V"}, {"WT_POS": 278, "PDB_POS": 286, "AA": "D"}, {"WT_POS": 279, "PDB_POS": 287, "AA": "I"}, {"WT_POS": 280, "PDB_POS": 288, "AA": "L"}, {"WT_POS": 281, "PDB_POS": 289, "AA": "M"}, {"WT_POS": 282, "PDB_POS": 290, "AA": "D"}, {"WT_POS": 283, "PDB_POS": 291, "AA": "L"}, {"WT_POS": 284, "PDB_POS": 292, "AA": "G"}, {"WT_POS": 285, "PDB_POS": 293, "AA": "A"}, {"WT_POS": 286, "PDB_POS": 294, "AA": "L"}, {"WT_POS": 287, "PDB_POS": 295, "AA": "A"}, {"WT_POS": 288, "PDB_POS": 296, "AA": "R"}, {"WT_POS": 289, "PDB_POS": 297, "AA": "N"}, {"WT_POS": 290, "PDB_POS": 298, "AA": "C"}, {"WT_POS": 291, "PDB_POS": 299, "AA": "G"}, {"WT_POS": 292, "PDB_POS": 300, "AA": "R"}, {"WT_POS": 293, "PDB_POS": 301, "AA": "E"}, {"WT_POS": 294, "PDB_POS": 302, "AA": "S"}, {"WT_POS": 295, "PDB_POS": 303, "AA": "R"}, {"WT_POS": 296, "PDB_POS": 304, "AA": "V"}, {"WT_POS": 297, "PDB_POS": 305, "AA": "D"}, {"WT_POS": 298, "PDB_POS": 306, "AA": "V"}, {"WT_POS": 299, "PDB_POS": 307, "AA": "A"}, {"WT_POS": 300, "PDB_POS": 308, "AA": "K"}, {"WT_POS": 301, "PDB_POS": 309, "AA": "S"}, {"WT_POS": 302, "PDB_POS": 310, "AA": "V"}, {"WT_POS": 303, "PDB_POS": 311, "AA": "T"}, {"WT_POS": 304, "PDB_POS": 312, "AA": "S"}, {"WT_POS": 305, "PDB_POS": 313, "AA": "G"}, {"WT_POS": 306, "PDB_POS": 314, "AA": "L"}, {"WT_POS": 307, "PDB_POS": 315, "AA": "G"}, {"WT_POS": 308, "PDB_POS": 316, "AA": "Y"}, {"WT_POS": 309, "PDB_POS": 317, "AA": "M"}, {"WT_POS": 310, "PDB_POS": 318, "AA": "H"}, {"WT_POS": 311, "PDB_POS": 319, "AA": "C"}, {"WT_POS": 312, "PDB_POS": 320, "AA": "C"}, {"WT_POS": 313, "PDB_POS": 321, "AA": "L"}, {"WT_POS": 314, "PDB_POS": 322, "AA": "N"}, {"WT_POS": 315, "PDB_POS": 323, "AA": "P"}, {"WT_POS": 316, "PDB_POS": 324, "AA": "L"}, {"WT_POS": 317, "PDB_POS": 325, "AA": "L"}, {"WT_POS": 318, "PDB_POS": 326, "AA": "Y"}, {"WT_POS": 319, "PDB_POS": 327, "AA": "A"}, {"WT_POS": 320, "PDB_POS": 328, "AA": "F"}, {"WT_POS": 321, "PDB_POS": 329, "AA": "V"}, {"WT_POS": 322, "PDB_POS": 330, "AA": "G"}, {"WT_POS": 323, "PDB_POS": 331, "AA": "V"}]
1 change: 1 addition & 0 deletions structure_data/wt_pdb_lookup/8ITL.json
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1 change: 1 addition & 0 deletions structure_data/wt_pdb_lookup/8JJ8.json
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