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QuPath

Open source software for bioimage analysis
README.md

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  1. qupath qupath Public

    QuPath - Open-source bioimage analysis for research

    Java 1.1k 285

  2. qupath-docs qupath-docs Public

    QuPath documentation

    Python 18 22

  3. qupath-extension-stardist qupath-extension-stardist Public

    QuPath extension to run StarDist nucleus detection

    Java 36 6

  4. qupath-extension-djl qupath-extension-djl Public

    A QuPath extension for working with Deep Java Library (https://djl.ai)

    Java 6 4

  5. qupath-extension-omero-web qupath-extension-omero-web Public

    QuPath extension to work with images through OMERO's web API

    Java 8 12

  6. qupath-extension-bioimageio qupath-extension-bioimageio Public

    A QuPath extension for working with the Bioimage Model Zoo (https://bioimage.io)

    Java 4 3

Repositories

Showing 10 of 42 repositories
  • qupath Public

    QuPath - Open-source bioimage analysis for research

    qupath/qupath’s past year of commit activity
    Java 1,082 GPL-3.0 285 36 6 Updated Dec 23, 2024
  • qupath-extension-djl Public

    A QuPath extension for working with Deep Java Library (https://djl.ai)

    qupath/qupath-extension-djl’s past year of commit activity
    Java 6 Apache-2.0 4 2 0 Updated Dec 23, 2024
  • qupath-extension-instanseg Public

    The official QuPath extension for InstanSeg

    qupath/qupath-extension-instanseg’s past year of commit activity
    Java 10 Apache-2.0 6 4 2 Updated Dec 18, 2024
  • qupath-catalog Public

    The catalog containing the QuPath extensions developed by the QuPath team

    qupath/qupath-catalog’s past year of commit activity
    0 0 0 0 Updated Dec 13, 2024
  • qupath-docs Public

    QuPath documentation

    qupath/qupath-docs’s past year of commit activity
    Python 18 22 7 1 Updated Dec 13, 2024
  • qupath-extension-training Public

    A QuPath extension to help with learning the software

    qupath/qupath-extension-training’s past year of commit activity
    Java 1 Apache-2.0 2 0 0 Updated Dec 13, 2024
  • qupath-extension-stardist Public

    QuPath extension to run StarDist nucleus detection

    qupath/qupath-extension-stardist’s past year of commit activity
    Java 36 Apache-2.0 6 2 0 Updated Dec 13, 2024
  • qupath-extension-wsinfer Public

    QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/

    qupath/qupath-extension-wsinfer’s past year of commit activity
    Java 22 Apache-2.0 7 2 0 Updated Dec 10, 2024
  • qupath-extension-align Public

    QuPath extension to interactively align images

    qupath/qupath-extension-align’s past year of commit activity
    Java 20 GPL-3.0 7 0 3 Updated Dec 10, 2024
  • c-blosc-jars Public

    JAR files for the c-blosc native library.

    qupath/c-blosc-jars’s past year of commit activity
    1 1 0 0 Updated Dec 10, 2024
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