An interactive graphing library for R

R toolkit for single cell genomics

Statistical Rethinking course and book package

Create Blogs and Websites with R Markdown

caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models

A list of scRNA-seq analysis tools

Fast, sensitive and accurate integration of single-cell data with Harmony

A repository for setting up a RNAseq workflow

An R package implementing the UMAP dimensionality reduction method.

Multi-subject Single Cell Deconvolution

caret models all the way down 🐢

Comparison of methods for trajectory inference on single-cell data 🥇

Network visualization with ggplot2

Collection of public scRNA-Seq datasets used by our group

NMF: A Flexible R package for Nonnegative Matrix Factorization

URD - Reconstruction of Branching Developmental Trajectories

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

Regression with Multiple Change Points

Dev version of instaR package: Access to Instagram API via R

Repository for the OpenMx Structural Equation Modeling package

Download Logs from the RStudio CRAN Mirror

methods for functional summary-based imputation

A system for blending regression models in R

Matrix eQTL: Ultra fast eQTL analysis via large matrix operations

Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM function.

Mouse cell atlas

Wrapper to a number of SNP web APIs

R package for analysing proteomics data

Simulate the NCAA tournament based on a kaggle-format bracket (with predictions for every possible matchup)