Regression with Multiple Change Points

A script that checks for a better Global Entry enrollment appointment time

Code for X-ING project

Cytograph version used for adult human-brain analysis

Interactive deep learning whole-cell segmentation and thresholding using partial annotations

MICS: cell-type-specific mediation detection

A modern curriculum vitae class for LaTeX

methods for functional summary-based imputation

RNA-seq quantification pipeline used by the eQTL Catalogue

Uplift modeling and causal inference with machine learning algorithms

Repository for Short Course: Deep Learning in Omics

Texts and tweets for new global entry interview slots

R code to work with the NIH RePORTER API

Testing for mediation effects in genome-wide epigenetic studies

Epiclomal package, software for clustering of sparse DNA methylation data

Common Factor Integration & Transfer learning (cFIT) for single cell RNA-seq data

A repository for setting up a RNAseq workflow

NMF: A Flexible R package for Nonnegative Matrix Factorization

A shell pipeline for analyzing expression and variants in RNA-seq data based on STAR-RSEM and GATK

Generalized Random Forests

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

An interactive graphing library for R

Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

Unbiased single-cell transcriptomic data cell type identification

Marker Gene Detection via Penalized Principal Component Analysis

Single cell simulator with gene co-expression

R package for analysing proteomics data