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Update README.md
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liangclab authored Nov 9, 2019
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Expand Up @@ -356,10 +356,6 @@ $Working_Script/22-Filling-Gap Scaffold2Ctg_Gap.txt Prosudo_ScaffoldNonEnzyme2Co
cat SuperContig.fasta ../$Bionano_NonScaffolded_Contig |awk 'BEGIN{count=1;}{if($0~/^>/){print ">SuperContig"count"END";count++;}else{print $0;}}' >../$genome_name-Final_Genome_HERA.fasta
```

# Availability

HERA is currently released under a commercial license but it is free for academic or research use. All codes in HERA are packed into a Tarball for users' easy use.

# Citing HERA

Du, H., Liang, C. (2018). Assembly of chromosome-scale contigs by efficiently resolving repetitive sequences with long reads. bioRxiv doi: https://doi.org/10.1101/345983
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