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Commits on Jan 16, 2025

• citation: Add preferred-citation, change title. (#242)

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Commits on Nov 20, 2024

• aviary: Update --build help message. (#222)

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Commits on Nov 15, 2024

• spades: Update to 4. (#216)

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Commits on Nov 8, 2024

• actions: test-aviary: Attempt fix. (#221) (#225)

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Commits on Nov 7, 2024

• actions: test-aviary: Attempt fix. (#221)

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Commits on Nov 2, 2024

• --coassemble: Fix regression.

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• --coassemble: Improve help message.

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• assemble/recover: Require users to specify coassembly or not.

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Commits on Nov 1, 2024

• config.yaml: Remove this extraneous file.

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Commits on Oct 30, 2024

• Add pyproject.toml.

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Commits on Dec 14, 2023

• das_tool: Use script not shell. (#187)

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Commits on Dec 11, 2023

• aviary: Improve and refactor help.

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• README: Streamline, improve.

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Commits on Dec 1, 2023

• Merge pull request #177 from rhysnewell/singlem-update

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Commits on Nov 29, 2023

• Merge pull request #175 from rhysnewell/cff-update

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• Merge pull request #176 from rhysnewell/megahit-params

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• singlem: Update to 0.16.0.

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• megahit: Specify -m in bytes.

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• cff-update: Update to v0.8.3.

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Commits on Oct 16, 2023

• citations: Improve them.

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• singlem_appraise: Do not stop on any failure.

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Commits on Oct 14, 2023

• Merge pull request #159 from rhysnewell/singlem-version-restrict

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• singlem: Restrict to 0.13.2. Fixes #157.

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Commits on Oct 2, 2023

• singlem: Start update.

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Commits on Aug 9, 2023

• docs/citations.md: Fix metaspades doi.

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• docs/citations.md: Update, add nicknames and DOIs.

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• citations.md: dos2unix it.

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Commits on Jul 26, 2023

• Merge pull request #101 from AroneyS/add-some-tests

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Commits on Nov 2, 2022

• checkm2: Fix path to benchmark file.

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Commits on Oct 22, 2022

• v0.5.4

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Commits on Oct 19, 2022

• bin: Fix typo in usage.

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• test: Add integration sanity check.

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• .gitignore: Add to it.

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• Merge branch 'minimal-testing' into main

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• checkm_rosella: Do not croak when no rosella bins.

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