Code for running RFdiffusion

Making Protein folding accessible to all!

An interactive NVIDIA-GPU process viewer and beyond, the one-stop solution for GPU process management.

Repository for publicly available deep learning models developed in Rosetta community

Clear implementation of arithmetic coding for educational purposes in Java, Python, C++.

toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files

Neural Networks for Protein Sequence Alignment

Reformer, the efficient Transformer, in Pytorch

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

View proteins and trajectories in the terminal

🤗 The largest hub of ready-to-use datasets for ML models with fast, easy-to-use and efficient data manipulation tools

Listing of papers about machine learning for proteins.

💥 Fast State-of-the-Art Tokenizers optimized for Research and Production

PyTorch library of layers acting on protein representations

PyTorch library for "Neural Painters: A learned differentiable constraint for generating brushstroke paintings"

A PyTorch Extension: Tools for easy mixed precision and distributed training in Pytorch

GPU & Accelerator process monitoring for AMD, Apple, Huawei, Intel, NVIDIA and Qualcomm

Experimental ground for optimizing memory of pytorch models

State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.

Reinforcement Learning in PyTorch

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

Implementation of 1D and 2D fast spline interpolation algorithm (Habermann and Kindermann 2007) in Python

⚡ A Fast, Extensible Progress Bar for Python and CLI

An open-source NLP research library, built on PyTorch.

Standardized data set for machine learning of protein structure