robinjugas
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CNproScan Public
CNV detection for prokaryote genomes using NGS sequencing data
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MAGeCKFlute Public
Forked from WubingZhang/MAGeCKFluteIntegrative analysis pipeline for pooled CRISPR functional genetic screens
R UpdatedSep 6, 2024 -
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ProcaryaSV Public
An ensemble structural variant calling pipeline driven by snakemake using multiple SV and CNV callers.
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Dataset of Epigenetic profiles of pediatric oncology tumors
Python UpdatedNov 24, 2023 -
ChromosomeMappings Public
Forked from dpryan79/ChromosomeMappingsThis repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
MIT License UpdatedNov 28, 2022 -
WSHPackage Public
Forked from MPIIComputationalEpigenetics/WSHPackageR package for the calculation of the following Within-Sample Heterogeneity Scores in Bisulfite Sequencing Data: FDRP, qFDRP, PDR, Epipolymorphism, Methylation Entropy and MHL
R GNU General Public License v3.0 UpdatedJun 20, 2022 -
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Scripts for IEEE MIPRO 2018 Conference paper
MATLAB UpdatedFeb 20, 2018 -
Script for IEEE CBMS paper 2017
MATLAB UpdatedFeb 20, 2018 -
OverlapDetectionByGSP Public
Overlap detection for genome assembly based on genomic signal processing
MATLAB GNU General Public License v3.0 UpdatedFeb 16, 2017 -
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CNOGpro Public
Forked from cran/CNOGpro❗ This is a read-only mirror of the CRAN R package repository. CNOGpro — Copy Numbers of Genes in prokaryotes
R UpdatedJan 12, 2015