https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1

Medical image analysis framework merging ANTsR and deep learning

Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks

This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-s…

Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation

MRI brain extraction tool

Deep Learning tools for brain medical images

The fast.ai course notebooks

Structural Neuroimaging Analysis in Python

Common curation/preprocessing/qc scripts for AOMIC

The fastai book, published as Jupyter Notebooks

The fastai deep learning library

Temporary home for fastai v2 while it's being developed

Notebooks for the "A walk with fastai2" Study Group and Lecture Series

MONAI Tutorials

AI Toolkit for Healthcare Imaging

This repository contains all code snippets and reports for a master's degree thesis focused on automatic Alzheimer diagnosis using Deep Learning and MRI images

DLTK Model Zoo

Deep Learning Toolkit for Medical Image Analysis

This repository includes the preprocessing steps for MRI Knee images. These files are then imported in my main model for Image Registration and Segmentation using Deep Learning

MP2RAGE Scripts - T1 map correction & Background noise removal

A Python package for modular causal inference analysis and model evaluations

BASH scripts to process and analyze neuroimaging data using FSL and Freesurfer

Workflows and interfaces for neuroimaging packages