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General-purpose programming language and toolchain for maintaining robust, optimal, and reusable software.

Zig 37,823 2,718 Updated Mar 7, 2025

Python implementation of the Loom file format - http://loompy.org

Python 142 37 Updated Dec 16, 2024

Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/

Python 280 16 Updated Mar 7, 2025

A Lean Persistent Homology Library for Python

C++ 290 62 Updated Mar 3, 2025

A high-performance topological machine learning toolbox in Python

Python 882 182 Updated Jun 18, 2024

Ripser: efficient computation of Vietoris–Rips persistence barcodes

C++ 324 81 Updated Mar 5, 2024

Colors for data scientists.

HTML 649 56 Updated Jan 10, 2024

Official open source SVG icon library for Bootstrap.

JavaScript 7,550 1,074 Updated Mar 4, 2025

🐚 Python-powered shell. Full-featured and cross-platform.

Python 8,639 661 Updated Mar 3, 2025

Easily compose images together without messing around with canvas

JavaScript 1,703 165 Updated Aug 17, 2023

Opinionated Ubuntu Setup

Shell 6,024 570 Updated Mar 5, 2025

shadcn/ui, but for Svelte. ✨

Svelte 6,164 383 Updated Mar 6, 2025

Single-cell epigenomics analysis tools

Python 248 31 Updated Dec 28, 2024

Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.

Python 97 27 Updated Mar 7, 2025

Tool for plotting sequencing data along genomic coordinates.

Python 259 8 Updated Jan 30, 2025

Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)

Python 248 9 Updated Feb 13, 2025

Qodo-Cover: An AI-Powered Tool for Automated Test Generation and Code Coverage Enhancement! 💻🤖🧪🐞

Python 4,873 397 Updated Feb 26, 2025

Swift Neighbor Embedding of Sparse Stochastic Graphs

C++ 20 10 Updated Jan 25, 2025

Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

Python 100 12 Updated Jan 20, 2025

An extremely fast Python linter and code formatter, written in Rust.

Rust 36,435 1,236 Updated Mar 7, 2025

Simple Python version management

Roff 41,090 3,131 Updated Feb 28, 2025

Kolmogorov Arnold Networks

Jupyter Notebook 15,474 1,458 Updated Jan 19, 2025

Cap'n Proto serialization/RPC system - Python bindings

Cython 481 123 Updated Sep 25, 2024

A curated list of awesome C++ (or C) frameworks, libraries, resources, and shiny things. Inspired by awesome-... stuff.

62,196 7,926 Updated Mar 6, 2025

Scalable WebGL-based scatter plot library build with Regl

JavaScript 203 27 Updated Mar 4, 2025

High Performance Visualization

C++ 234 47 Updated Mar 25, 2024

simple terminal UI for git commands

Go 57,439 1,978 Updated Mar 7, 2025

PyScript is an open source platform for Python in the browser. Try PyScript: https://pyscript.com Examples: https://tinyurl.com/pyscript-examples Community: https://discord.gg/HxvBtukrg2

Python 18,222 1,458 Updated Mar 3, 2025

A pairwise sequence aligner written in Rust

Rust 129 11 Updated Mar 4, 2025

C++ API for various matrix types.

C++ 13 2 Updated Feb 5, 2025
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