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Fix/free text #54

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merged 8 commits into from
Oct 29, 2024
Merged

Fix/free text #54

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4aab2ae
add newline to test
Oct 25, 2024
92613c0
fix: freetext translation
Oct 25, 2024
fe854e7
feature: add FHIR dependency and update others
Oct 25, 2024
ef6b74a
feature: add validate using HAPI FHIR
Oct 29, 2024
07ff7ad
optimize pom
Oct 29, 2024
246c6c1
optimize docker build
Oct 29, 2024
e8c2579
add .dockerignore
Oct 29, 2024
a125464
fix sh
Oct 29, 2024
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add newline to test
  • Loading branch information
[email protected] committed Oct 25, 2024
commit 4aab2aeb6b1021cb4e1e0e3e029dcdbe2f854e2e
6 changes: 4 additions & 2 deletions src/test/resources/clinical_data/InputData/File-3-ADT2_Testpatient.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -49,10 +49,12 @@
<Diagnose Tumor_ID="012001">
<Primaertumor_ICD_Code>C43.4</Primaertumor_ICD_Code>
<Primaertumor_ICD_Version>10 2024 GM</Primaertumor_ICD_Version>
<Primaertumor_Diagnosetext>Malignes Melanom oberer Rücken mittig</Primaertumor_Diagnosetext>
<Primaertumor_Diagnosetext>Malignes Melanom oberer Rücken
mittig</Primaertumor_Diagnosetext>
<Primaertumor_Topographie_ICD_O>C44.5</Primaertumor_Topographie_ICD_O>
<Primaertumor_Topographie_ICD_O_Version>33</Primaertumor_Topographie_ICD_O_Version>
<Primaertumor_Topographie_ICD_O_Freitext>oberer quadrant</Primaertumor_Topographie_ICD_O_Freitext>
<Primaertumor_Topographie_ICD_O_Freitext>oberer
quadrant</Primaertumor_Topographie_ICD_O_Freitext>
<Diagnosedatum>02.03.2024</Diagnosedatum>
<Diagnosesicherung>2</Diagnosesicherung>
<Seitenlokalisation>M</Seitenlokalisation>
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12 changes: 8 additions & 4 deletions src/test/resources/clinical_data/InputData/File-4-oBDS_Testpatient.xml
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Expand Up @@ -64,12 +64,14 @@
</Morphologie_ICD_O>
</Tumorzuordnung>
<Diagnose>
<Primaertumor_Diagnosetext>Malignes Melanom oberer Rücken mittig</Primaertumor_Diagnosetext>
<Primaertumor_Diagnosetext>Malignes Melanom oberer Rücken
mittig</Primaertumor_Diagnosetext>
<Primaertumor_Topographie_ICD_O>
<Code>C44.5</Code>
<Version>33</Version>
</Primaertumor_Topographie_ICD_O>
<Primaertumor_Topographie_Freitext>oberer quadrant</Primaertumor_Topographie_Freitext>
<Primaertumor_Topographie_Freitext>oberer
quadrant</Primaertumor_Topographie_Freitext>
<Diagnosesicherung>2</Diagnosesicherung>
<Menge_Fruehere_Tumorerkrankung>
<Fruehere_Tumorerkrankung>
Expand Down Expand Up @@ -253,8 +255,10 @@
</Morphologie_ICD_O>
</Tumorzuordnung>
<Pathologie Befund_ID="Befund_ID1">
<Primaertumor_Diagnosetext>Malignes Melanom oberer Rücken mittig-pathologie</Primaertumor_Diagnosetext>
<Primaertumor_Topographie_Freitext>oberer quadrant-pathologie</Primaertumor_Topographie_Freitext>
<Primaertumor_Diagnosetext>Malignes Melanom oberer Rücken
mittig-pathologie</Primaertumor_Diagnosetext>
<Primaertumor_Topographie_Freitext>oberer
quadrant-pathologie</Primaertumor_Topographie_Freitext>
<Diagnosesicherung>2-pathologie</Diagnosesicherung>
<Histologie Histologie_ID="040232-pathologie">
<Tumor_Histologiedatum Datumsgenauigkeit="E">2024-03-02</Tumor_Histologiedatum>
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