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Update all - never released 0.7.0
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DLBPointon committed Mar 7, 2025
1 parent 81e8cc3 commit 83f9f60
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2 changes: 1 addition & 1 deletion .nf-core.yml
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Expand Up @@ -18,7 +18,6 @@ lint:
- .github/workflows/awstest.yml
- .github/workflows/awsfulltest.yml
- conf/igenomes.config
- assets/multiqc_config.yml
files_unchanged:
- LICENSE
- CODE_OF_CONDUCT.md
Expand All @@ -34,6 +33,7 @@ lint:
- assets/email_template.html
multiqc_config:
- report_comment
- assets/multiqc_config.yml
nextflow_config:
- manifest.name
- manifest.homePage
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23 changes: 8 additions & 15 deletions CHANGELOG.md
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Expand Up @@ -4,20 +4,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
Naming based on: [Audiologists](https://en.wikipedia.org/wiki/Category:Audiologists).

## v0.7.1 - Raymond Carhart (H1) [12/02/2025]

- curationpretext has been updated to [1.2.0 - UNSC Spirit-of-Fire](https://github.com/sanger-tol/curationpretext/releases/tag/1.2.0)
- removed `-resume` from nested pipelines as it isn't particularly useful seeing as resuming the main pipeline will re-start those processes rather than resume them.
- Deleting out of date files (multiqc.yaml, btk_draft.yaml)
- Adding new config file (./conf/sanger-tol-btk.config) which should overwrite the

### Software dependencies

| Dependency | Old version | New version |
| ---------------------------- | ------------------- | --------------------------- |
| sanger-tol/curationpretext\* | 1.1.0 (UNSC Delphi) | 1.2.0 (UNSC Spirit-of-Fire) |

## v0.7.0 - Raymond Carhart [12/02/2025]
## v0.7.0 - Raymond Carhart [08/03/2025]

- Removing the mapping subworkflow as it is no longer needed.
- This was a requirement before BLOBTOOLKIT implemented it's own mapping subworkflow.
Expand All @@ -26,10 +13,16 @@ Naming based on: [Audiologists](https://en.wikipedia.org/wiki/Category:Audiologi
- BTK doesn't have to struggle with the much larger mapped bam that was being created.
- NF-TEST implementation.
- We have implemented an output file sanity check rather than rely soley on pipeline completion.
- curationpretext has been updated to [1.2.0 - UNSC Spirit-of-Fire](https://github.com/sanger-tol/curationpretext/releases/tag/1.2.0)
- removed `-resume` from nested pipelines as it isn't particularly useful seeing as resuming the main pipeline will re-start those processes rather than resume them.
- Deleting out of date files (multiqc.yaml, btk_draft.yaml)
- Adding new config file (./conf/sanger-tol-btk.config) which should overwrite the

### Software dependencies

No Software updates
| Dependency | Old version | New version |
| ---------------------------- | ------------------- | --------------------------- |
| sanger-tol/curationpretext\* | 1.1.0 (UNSC Delphi) | 1.2.0 (UNSC Spirit-of-Fire) |

### Parameters

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