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add idd model vignette #60

add idd model vignette

add idd model vignette #60

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: R-CMD-check
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-pandoc@v2
- name: Install libbi (linux)
if: runner.os == 'linux'
run: |
sudo apt-get install build-essential libblas-dev liblapack-dev \
libqrupdate-dev libboost-all-dev libgsl0-dev libnetcdf-dev \
autoconf automake libthrust-dev cpanminus \
libmodule-install-perl curl
curl -fLo /tmp/LibBi.tar.gz "https://github.com/lawmurray/LibBi/archive/stable.tar.gz"
tar xzf /tmp/LibBi.tar.gz -C ~
cd ~/LibBi-stable
sudo cpanm --installdeps --notest .
sudo cpanm --force .
cd ..
- name: Install libbi (mac)
if: runner.os == 'macOS'
run: brew install libbi
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true