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segalmicrobiomelab Follow

Overview Repositories 32 Projects 0 Packages 0 Stars 13

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segalmicrobiomelab

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How many accounts can fit on the head of a pin

NYU Translational Lung Biology Laboratory (segal) segalmicrobiomelab

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How many accounts can fit on the head of a pin

This is the code repository for microbiome, metabolome, transcriptome, and metagenomic projects from the NYU Translational Lung Biology Laboratory

20 followers · 15 following

Division of Pulmonary, Critical Care, and Sleep Medicine
New York, NY
11:16 (UTC -05:00)
https://orcid.org/0000-0001-8547-5678

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Overview Repositories 32 Projects 0 Packages 0 Stars 13

Overview
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Stars

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Last updated Name Stars

diet.fiber.colon.cancer Public

R Updated Nov 13, 2024
Microbial_Metabolism Public

R 1 Updated Nov 5, 2024
PASC_paper Public

PASC Repository

1 Updated Aug 23, 2024
ResisTB_documentation Public

The code and QIIME2 objects from the ResisTB manuscript.

R 1 Updated May 24, 2024
TB_pemax Public

South Africa Tuberculosis Project Submission

R Updated Apr 20, 2024
Early.Stage.Lung.Adenocarcinoma.Recurrence.Microbiome Public

R Updated Apr 9, 2024
Transplant_PGD_microbiome_paper Public

R Updated Feb 12, 2024
COVID_thrombosis_and_transcriptome Public

Updated Dec 11, 2023
SARS-CoV-2.airway.adaptive.immune.response Public

R Updated Oct 2, 2023
Transplant_ACR_microbiome_paper Public

R Updated Sep 6, 2023
Mild_Moderate_COPD_microbiome Public

Data Analysis for Manuscript

R Updated Sep 2, 2023
drought_index Public

practice

MIT License Updated Nov 21, 2022
malignant_pleural_fluid Public

R Updated Aug 6, 2022
lung_cancer_prognosis_microbiome Public

Lung Cancer Metagenome Manuscript

HTML 3 Updated Feb 7, 2022
SARS_CoV2 Public

R 7 6 Updated Nov 18, 2021
HPC_R_iCellR Public

R Updated Nov 17, 2021
QIIME2_general_repository Public

Shell 2 Updated Jul 21, 2021
niosh_microbiome_project Public

R 1 Updated Dec 10, 2020
murine.host.microbiota.interaction Public

Murine dysbiosis experiments

R Updated Dec 10, 2020
BARTB_Naidoo_Paper Public

BARTB Repository Code

R Updated Jul 30, 2020
bronchiectasis.neutrophil.elastase Public

Sputum Neutrophil Elastase associates with microbiota and P.aeruginosa in bronchiectasis

R Updated Apr 30, 2020
lung_cancer_microbiome Public

rna-seq microbiome transcriptome rna-seq-analysis 16s 16s-rrna multiomics

R 8 2 Updated Feb 5, 2020
functional_microbiomics Public

Functional Microbiome repository code

R 8 Updated Jan 31, 2020
segalmicrobiomelab.github.io Public

HTML 1 Updated Jan 6, 2020
test Public

pulling from sulaimanwalsh

Updated Oct 25, 2019
ntm_bronchiectasis_microbiome Public

R Updated Aug 2, 2018
OSA_microbiome_repository Public

R 1 Updated Jul 17, 2018
pediatric_chronic_cough_microbiome Public

Pediatric chronic cough microbiome code

R Updated May 17, 2018
ATS_microbiome_commands Public

1 Updated Jan 12, 2018
QIIME1_general_repository Public

Updated Jan 12, 2018

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NYU Translational Lung Biology Laboratory (segal) segalmicrobiomelab

Achievements

Achievements

diet.fiber.colon.cancer Public

Microbial_Metabolism Public

PASC_paper Public

ResisTB_documentation Public

TB_pemax Public

Early.Stage.Lung.Adenocarcinoma.Recurrence.Microbiome Public

Transplant_PGD_microbiome_paper Public

COVID_thrombosis_and_transcriptome Public

SARS-CoV-2.airway.adaptive.immune.response Public

Transplant_ACR_microbiome_paper Public

Mild_Moderate_COPD_microbiome Public

drought_index Public

malignant_pleural_fluid Public

lung_cancer_prognosis_microbiome Public

SARS_CoV2 Public

HPC_R_iCellR Public

QIIME2_general_repository Public

niosh_microbiome_project Public

murine.host.microbiota.interaction Public

BARTB_Naidoo_Paper Public

bronchiectasis.neutrophil.elastase Public

lung_cancer_microbiome Public

functional_microbiomics Public

segalmicrobiomelab.github.io Public

test Public

ntm_bronchiectasis_microbiome Public

OSA_microbiome_repository Public

pediatric_chronic_cough_microbiome Public

ATS_microbiome_commands Public

QIIME1_general_repository Public