📮 A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study

xCell 2.0: Robust Cell Type Enrichment Analysis

Single cell Type Enrichment Analysis for Phenotypes (STEAP)

deTS

R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.

TCSC (Tissue co-regulation score regression) is a statistical genetics method to identify causal tissues in diseases and complex traits.

An R package to manipulate and explore UK Biobank data

A rapido and lightweight method for PGS computation

The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation

Exploring metaCCA method on UK Biobank data

echoverse module: LD downloading and processing

Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

Polygenic prediction via continuous shrinkage priors

The PheWAS R package

GWAS for survival analysis in large cohorts

Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data

Running GWAS on Kidney's latent phenotypes via REGENIE v.2.1

❗ This is a read-only mirror of the CRAN R package repository. gwasforest — Make Forest Plot with GWAS Data. Homepage: https://github.com/yilixu/gwasforest Report bugs for this package: https://git…

Fast manhattenplots using ggplot2

🗻 Fuji plot—a circos representation of multiple GWAS results— 🗻

A wrapper for liftOver for converting plink genotype data between different genome reference builds

Notes and code for running UK Biobank GWAS at the MRC IEU

Polygenic risk score analyses between autoimmune diseases and depression in UK Biobank