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single-cell-rna-sequencing

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  1. single_cell_portal single_cell_portal Public

    Forked from AswinSSoman/single_cell_portal

    Tutorials, workflows, and convenience scripts for Single Cell Portal

    Python

  2. SingleR SingleR Public

    Forked from AswinSSoman/SingleR

    SingleR: Single-cell RNA-seq cell types Recognition

    HTML 1

  3. scRNAseq-analysis-notes scRNAseq-analysis-notes Public

    Forked from AswinSSoman/scRNAseq-analysis-notes

    my scRNAseq analysis notes

    1

  4. kBET kBET Public

    Forked from AswinSSoman/kBET

    An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.

    R 1

  5. scanorama scanorama Public

    Forked from AswinSSoman/scanorama

    Panoramic stitching of heterogeneous single cell transcriptomic data

    Python 1

  6. SAFEclustering SAFEclustering Public

    Forked from AswinSSoman/SAFEclustering

    SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data

    R 1

Repositories

Showing 10 of 54 repositories
  • cellcoal Public Forked from dapogon/cellcoal

    CellCoal: coalescent simulation of single-cell NGS genotypes

    single-cell-rna-sequencing/cellcoal’s past year of commit activity
    C 0 3 0 0 Updated Feb 11, 2020
  • single-cell-pseudotime Public Forked from agitter/single-cell-pseudotime

    An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

    single-cell-rna-sequencing/single-cell-pseudotime’s past year of commit activity
    0 CC-BY-4.0 63 0 0 Updated May 18, 2019
  • single_cell_portal Public Forked from AswinSSoman/single_cell_portal

    Tutorials, workflows, and convenience scripts for Single Cell Portal

    single-cell-rna-sequencing/single_cell_portal’s past year of commit activity
    Python 0 25 0 0 Updated Feb 11, 2019
  • SingleR Public Forked from AswinSSoman/SingleR

    SingleR: Single-cell RNA-seq cell types Recognition

    single-cell-rna-sequencing/SingleR’s past year of commit activity
    HTML 0 GPL-3.0 101 0 0 Updated Dec 27, 2018
  • scRNAseq-analysis-notes Public Forked from AswinSSoman/scRNAseq-analysis-notes

    my scRNAseq analysis notes

    single-cell-rna-sequencing/scRNAseq-analysis-notes’s past year of commit activity
    0 MIT 164 0 0 Updated Dec 27, 2018
  • kBET Public Forked from AswinSSoman/kBET

    An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.

    single-cell-rna-sequencing/kBET’s past year of commit activity
    R 0 24 0 0 Updated Dec 20, 2018
  • scanorama Public Forked from AswinSSoman/scanorama

    Panoramic stitching of heterogeneous single cell transcriptomic data

    single-cell-rna-sequencing/scanorama’s past year of commit activity
    Python 0 MIT 50 0 0 Updated Dec 11, 2018
  • SAFEclustering Public Forked from AswinSSoman/SAFEclustering

    SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data

    single-cell-rna-sequencing/SAFEclustering’s past year of commit activity
    R 0 15 0 0 Updated Dec 5, 2018
  • umap Public Forked from AswinSSoman/umap

    Uniform Manifold Approximation and Projection

    single-cell-rna-sequencing/umap’s past year of commit activity
    Python 0 BSD-3-Clause 825 0 0 Updated Dec 1, 2018
  • cicero Public Forked from AswinSSoman/cicero
    single-cell-rna-sequencing/cicero’s past year of commit activity
    R 0 MIT 9 0 0 Updated Nov 29, 2018
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