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Predictive NeuroImaging Lab, Institute of Artificial Intelligence in Medicine, Department of Diagnostic and Interventional Radiology and Neuroradiology,, University Hospital Essen
- Essen, Germany
- https://pni-lab.github.io/
- @spisaktamas
Highlights
- Pro
Stars
Python script for "Quadric Edge Collapse Decimation"
Connectome-based Hopfiled Neural Networks (fcHNN)
A new markup-based typesetting system that is powerful and easy to learn.
A drop-in replacement for Scikit-Learn’s GridSearchCV / RandomizedSearchCV -- but with cutting edge hyperparameter tuning techniques.
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Minimal scripts available for predictions on multiple datasets
The Resting-state Pain susceptibility Network signature.
Modeling and statistical inference on fMRI data in Python
Conda environment for neuroimaging analysis in python, R, etc
c++ implementation of the pTFCE method (https://spisakt.github.io/pTFCE/)
rsHRF: A Toolbox for Resting State HRF Deconvolution and Connectivity Analysis (MATLAB)
A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
R interface to the ANTs biomedical image processing library
Neuroimaging analysis and visualization suite
Probabilistic Threshold-Free Cluster Enhancement of Neuroimages
Analyses for "The effect of experimental placebo interventions on cerebral pain signature activity – a meta-analysis" by the placebo imaging collaboration. Requires MATLAB (2016b+SPM12+CANlab toolb…
Extension interfaces and modular workflow system for using nipype for small-animal MR imaging