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University of Pennsylvania
- Philadelphia, PA
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18:03
(UTC -05:00) - tsalo.github.io
- https://bsky.app/profile/tsalo.bsky.social
Highlights
- Pro
BIDS-related tools
An easy tool to copy/move/symlink files from one directory to the other!
A Python package to read/write/query/validate BIDS datasets.
Simple program for template-based natural language rendering of reports based on BIDS neuroimaging data.
Repository for collaboration on NIDM terminologies
Discussions and suggestions of backwards incompatible changes to BIDS
Brain Imaging Data Structure (BIDS) Specification
Neuroimaging Data Model (NIDM): describing neuroimaging data and provenance
This an example app that can serve as a template.
Python tools for querying and manipulating BIDS datasets.
Specification documents for HED (Hierarchical Event Descriptors)
A suite of tools to help people organize their data
A template repository for PyBIDS extensions
Repository for templates to generate methods section descriptions of BIDS datasets
A curated list of awesome BIDS projects, proposals, apps and resources
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
Organizing and coordinating BIDS extension proposal 28 : BIDS Provenance
Miscellaneous maintenance tools for the broader BIDS ecosystem.
A small python package to access publicly available brain atlases in a BIDS-Atlas compliant manner.
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
Pydantic model generator for BIDS metadata
Webapp to easily display BIDS formatted datasets