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Cool neuroimaging tools
a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.
A Python implementation of Partial Least Squares (PLS) decomposition
BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |
A graphical user interface for feature extraction from heart- and breathing biosignals.
Diffusion map based embedding and alignment
Modeling of low and high frequency physiological fluctuations in fMRI based on photoplethysmograph (PPG)
Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data
A robust T1w-based inverse gradient susceptibility artifact correction method for high-resolution EPI-fMRI
Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization
Functional localizer experiment used to define category-selective cortical regions
Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.
A free & open python tool for population receptive field analysis.
List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data
Harmonizing neuroimaging data across scanners and sites
BART: Toolbox for Computational Magnetic Resonance Imaging
Automated Preprocessing Pipeline for Fetal Resting-State fMRI Data
fMRI phase processing interfaces and workflows in nipype
Identification of physiological response functions in resting-state fMRI
Multi-study decoding models for task functional MRI data.