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  1. Superfold Superfold Public

    Forked from Weeks-UNC/Superfold

    SuperFold is a pipeline that uses output data from ShapeMapper to model RNA secondary structures, including pseudoknots; identify de novo regions with well-defined and stable structures; and visual…

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  2. deltaSHAPE deltaSHAPE Public

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    SHAPE-MaP both measures RNA flexibility at single-nucleotide resolution and quantifies the uncertainties in these measurements. The deltaSHAPE framework incorporates these uncertainties to allow de…

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  3. shapemapper2 shapemapper2 Public

    Forked from Weeks-UNC/shapemapper2

    Public repository for ShapeMapper 2 releases

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  5. exrex exrex Public

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  6. ViennaRNA ViennaRNA Public

    Forked from ViennaRNA/ViennaRNA

    The ViennaRNA Package

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