expressions on VCFs

Script, capture and replay terminal sessions

Scalable and flexible workflow orchestration platform that seamlessly unifies data, ML and analytics stacks.

🚀 Awesome list of open source applications for macOS. https://t.me/s/opensourcemacosapps

Tabular seff

QuickEd is a high-performance exact sequence alignment based on the bound-and-align paradigm.

A library to interface with a locally running Ollama server instance

🚀 seqfu - Sequece Fastx Utilities

Nextflow pipeline to generate simulated amplicon datasets

µbinfie blog

Scripts and docs from the datascienceatqib group

A virtual dog-sitter that tracks, classifies, and responds to dog audio.

A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

Contains a simple live demo of MNIST training and classification using Nim + Arraymancer + Plotly

CLI client for the Mastodon social network API

Template of a (PDF/HTML) report document using pandoc

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

A flexible pipeline for complete analysis of bacterial genomes

Examples in the MLX framework

🚀 Level up your GitHub profile readme with customizable cards including LOC statistics!

A tiling window manager for macOS based on binary space partitioning

Package to extract Unannotated Regions from prokaryotic genomes report coding and pseudogenised genes delimited by stop codons - Named StORFs (Stop - Open Reading Frames)

Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data

This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED database.

🦠📇 Microbial genomes-to-report pipeline

🤖 Just a command runner

frame-shift correction for long-read (meta)genomics

⚡ ♒ Rapid prokaryotic genome annotation

Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.