MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

Working with molecular structures in pandas DataFrames

Small python wrapper for the 3decision REST API

💎 Detect , track and extract the optimal face in multi-target faces (exclude side face and select the optimal face).

Bokeh Server over a Django Web Framework

Treemap example for bokeh python plotting module

Turn STL files into voxels, images, and videos

Pure Python implementation of the squarify treemap layout algorithm

Area-weighted venn-diagrams for Python/matplotlib

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

A fast and sensitive gapped read aligner

Graph-based alignment (Hierarchical Graph FM index)

Transcript assembly and quantification for RNA-Seq

Fitbit Provider for the PHP League's OAuth 2.0 Client

Pure-python implementation of UCSC liftOver genome coordinate conversion

Fitbit API Python Client Implementation

Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl

Program for analysing NGS data.

Temporary cellPACK database cellPACK_database_1.1.0 until Heroku web service database is completed

A Java API for high-throughput sequencing data (HTS) formats.

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

📇 Retrieve data in genomic intervals with a Python interface for tabix.

Plot on map projections (with coastlines and political boundaries) using matplotlib

C library for high-throughput sequencing data formats

Specifications of SAM/BAM and related high-throughput sequencing file formats

A set of extensions for Nemo

Resumes generated using the GitHub informations

Experimental EIGENSOFT performance improvements.

A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is …