DSL for HTML that targets Marimo

Django starter project with 🔋

TCR and BCR assembly from RNA-seq data

R package for the analysis of single-cell immune repertoires

A reactive notebook for Python — run reproducible experiments, query with SQL, execute as a script, deploy as an app, and version with git. All in a modern, AI-native editor.

Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level

The world's easiest, most powerful edgar library

A single cell transcriptomics pipeline for QC, integration and making the data presentable

Neovim plugin to edit R files

Significance analysis for clustering single-cell RNA-sequencing data

A comprehensive library for computational molecular biology

A Comet-based, best practices proteomics pipeline.

Example code for HTML, CSS, and Javascript for Web Developers Coursera Course

Web components made simple and declarative

Website sources for Applied Machine Learning for Tabular Data

R Trelliscope package

pipeline for working with PacBio long read RNA data using the outputs of isoseq3

Create web-based user interfaces with Python. The nice way.

Virtual whiteboard for sketching hand-drawn like diagrams

Modern columnar data format for ML and LLMs implemented in Rust. Convert from parquet in 2 lines of code for 100x faster random access, vector index, and data versioning. Compatible with Pandas, Du…

Bioconductor-friendly bindings for Parquet files.

Command line scientific data management tool

quarto Revealjs pluging for styled codechunks

Open-source developer platform to power your entire infra and turn scripts into webhooks, workflows and UIs. Fastest workflow engine (13x vs Airflow). Open-source alternative to Retool and Temporal.

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Enrichment Networks for Pathway Enrichment Analysis

Framework for sensitive DE testing (using neighbourhoods)