nextstrain / mpox Star 45 Code Issues Pull requests Nextstrain build for mpox virus metadata bioinformatics pipeline pathogen phylogenetics genbank augur nextstrain auspice virus-evolution genomic-epidemiology monkeypox mpox Updated Dec 20, 2024 Python
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BCCDC-PHL / covflo Star 2 Code Issues Pull requests Nextflow pipeline for generation of BCCDC routine SARS-CoV-2 phylogenetic trees to be visualized with Auspice. nextflow phylogenetics trees viral evolutionary nextstrain auspice sars-cov-2 microbe Updated Feb 17, 2024 Python
hivlab / sarscov2-epidemiology Star 0 Code Issues Pull requests Visualisation of SARS-CoV-2 genomic epidemiology visualisation dataset estonia auspice sars-cov-2 Updated Feb 20, 2023 Python