akshayparopkari / RNAseq Star 6 Code Issues Pull requests Preprocessing and differential expression analysis for QuantSeq 3' mRNA-seq data visualization open-source quality-control rna-seq r python3 preprocess fungi bash-script differential-expression sequence-alignment candida-albicans Updated May 9, 2023 Shell
FaithGriffin / CandidaPhylo Star 0 Code Issues Pull requests Focused on constructing a phylogenetic tree from Philippine strains of Candida albicans. docker json picard docker-image samtools bwa-mem dockstore cromwell wdl-workflow candida-albicans Updated May 17, 2022 WDL
akshayparopkari / discover_tfbs Star 0 Code Issues Pull requests Discover transcription factor (TF) binding specificities/sites (TFBS) using binding site motif sequence and structural information. python bash machine-learning bioinformatics transcription-factors r pathogen biology scripting computational-biology binding-sites fungal biofilm candida-albicans Updated Jun 17, 2024 Python