nf-core / circrna Star 44 Code Issues Pull requests circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data workflow bioinformatics rna-seq pipeline genomics nextflow ngs circrna mirna circular-rna circrna-prediction mirna-targets nf-core circrna-pipeline Updated Oct 10, 2024 Nextflow
eandresleon / miARma-seq Star 14 Code Issues Pull requests miARma-seq: a comprehensive tool for miRNA, mRNA and circRNA analysis rna-seq-analysis mirna rnaseq-pipeline circrna-pipeline mirna-seq Updated Apr 27, 2022 Perl
OncoHarmony-Network / circrna-pipeline Star 8 Code Issues Pull requests Cancer circRNA identification pipeline with an ensemble approach cancer circrna-pipeline Updated Jan 31, 2024 Shell
czheluo / circRNA Star 0 Code Issues Pull requests Predict circRNA pipeline circrna rnaseq-pipeline circrna-pipeline Updated Jun 30, 2021 Perl
CCBR / CCBR_circRNA_AmpliconSeq Star 0 Code Issues Pull requests Snakemake workflow to process circRNA AmpliconSeq datasets generated to study circRNAs in KSHV and human hosts using divergent primers. circrna amplicon-sequencing amplicon-pipeline snakemake-workflow circrna-pipeline Updated Jan 23, 2024 Shell