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Run your own AI cluster at home with everyday devices 📱💻 🖥️⌚
Fast SQL-only data application builder. Automatically build a UI on top of SQL queries.
Reconstruct big images from overlapping tiled images on a Spark cluster.
Modern, open source microCT methods to enhance accessibility, scalability, and reproducibility
Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures
Command-line client for Fractal
QuPath extension for Segment Anything Model (SAM)
A modern desktop interface for Linux. Improve your user experience and get rid of the anarchy of traditional desktop workflows. Designed to simplify navigation and reduce the need to manipulate win…
A napari plugin to process and analyse images with chatGPT!
A curated list of resources for Image and Video Deblurring
Exercise repository for the "Deep Learning for Microscopy Image Analysis" course at the MBL.
An introduction to bioimage analysis - http://bioimagebook.github.io
CBRAIN is a flexible Ruby on Rails framework for accessing and processing of large data on high-performance computing infrastructures.
LORIS is a web-accessible database solution for longitudinal multi-site studies.
Aydin — User-friendly, Fast, Self-Supervised Image Denoising for All.
Concise and beautiful algorithms written in Julia
GPU-accelerated general purpose image processing and image analysis in napari
Automated 3D brain registration with support for multiple species and atlases.
Self-supervised learning for microscopy images
Python project containing Ice remoting code for OMERO
"rsync for cloud storage" - Google Drive, S3, Dropbox, Backblaze B2, One Drive, Swift, Hubic, Wasabi, Google Cloud Storage, Azure Blob, Azure Files, Yandex Files
Python Data Science Handbook: full text in Jupyter Notebooks
An open-source application for biological image analysis
Inspection and statistical analysis of high throughput microscopy data