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GBS-Assembly-Typer-CRL-nf Public
Forked from sanger-bentley-group/GBS-Typer-sanger-nfGBS Typer Pipeline in Nextflow
Python GNU General Public License v3.0 UpdatedJun 14, 2024 -
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micropipe Public
Forked from BeatsonLab-MicrobialGenomics/micropipeA pipeline for high-quality bacterial genome construction using ONT sequencing
HTML GNU General Public License v3.0 UpdatedMay 26, 2023 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedMar 15, 2023 -
gps-unified-pipeline Public
Forked from GlobalPneumoSeq/gps-pipelineNextflow Pipeline for processing Streptococcus pneumoniae sequencing raw reads (FASTQ files) by the GPS Project (Global Pneumococcal Sequencing Project)
Nextflow GNU General Public License v3.0 UpdatedJan 26, 2023 -
wf-artic Public
Forked from epi2me-labs/wf-articARTIC SARS-CoV-2 workflow and reporting
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SARS-COV-2_B4B Public
Forked from WCSCourses/SARS-COV-2_B4BThis is a repository for development of the SARS-CoV-2 Bioinformatics for Beginners Course
Jupyter Notebook UpdatedAug 27, 2022 -
nf-co.re Public
Forked from nf-core/websiteCode and files for the main nf-core website.
PHP MIT License UpdatedApr 13, 2022 -
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bactmap Public
Forked from nf-core/bactmapA mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
Nextflow MIT License UpdatedMar 15, 2022 -
primer-schemes Public
Forked from artic-network/primer-schemesPrimer schemes for real-time genome epidemiology
Python Creative Commons Attribution 4.0 International UpdatedNov 28, 2021 -
artic-ncov2019 Public
Forked from artic-network/artic-ncov2019ARTIC nanopore protocol for nCoV2019 novel coronavirus
Python Creative Commons Attribution 4.0 International UpdatedNov 28, 2021