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3 followers · 1 following
  • PrecisionPhage Ltd
  • University of St Andrews
  • X @VHoikkala

Achievements

Achievement: Pull SharkAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull SharkAchievement: Arctic Code Vault Contributor

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vihoikka/README.md
  • 👋 Hi, I’m @vihoikka
  • 👀 I’m interested in bioinformatics and web development
  • 🌱 I’m currently learning Python, R, Django
  • 📫 How to reach me: Twitter @Vihoikka

Popular repositories Loading

  1. hoikkala_etal_typeIII_effectors hoikkala_etal_typeIII_effectors Public

    Scripts used to generate the data on Hoikkala, Graham and White paper on new type III CRISPR-Cas effectors

    Python 1

  2. spacerAQ_vh spacerAQ_vh Public

    Custom code for analyzing data in Hoikkala et al. 2021 (DOI: https://doi.org/10.1128/mBio.03338-20)

    R

  3. SNP_mapper SNP_mapper Public

    Python

  4. seqbank seqbank Public

    Simple program for storing and manipulating short nucleotide sequences

  5. vulgenomics vulgenomics Public

    General tools for genome assembly etc

    Python

  6. crispr-mucin crispr-mucin Public

    Code for analysing data in Almeida & Hoikkala et al. 2021 (submitted)

    R