💥 Blazing fast terminal file manager written in Rust, based on async I/O.

Biodiversity Viewer

SeqHasher - A tool for hashing individual sequences in FASTA files

PHYling pipeline for species tree building from annotated genomes (see https://github.com/stajichlab/AAFTF and https://github.com/nextgenusfs/funannotate for assembly and annotation steps)

Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.

nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.

Assembly and binning of metagenomes

Amplicon sequencing analysis workflow using DADA2 and QIIME2

🍄 Qiime2 ITS classifiers for the UNITE database

A lightweight and high-performance bioinformatics package in Golang

R package for statistical tools with big matrices stored on disk.

Quick serialization of R objects

Tabular seff

Efficient manipulation of biological strings

Parse NCBI taxonomy and accessions to find taxonomic assignments

Simple terminal alignment viewer

Polars R binding

Haptic input knob with software-defined endstops and virtual detents

Fast, secure, efficient backup program

Config driven, easy backup cli for restic.

Python package with helper tools for the nf-core community.

🎨 Lightweight Color Highlight colorizer for Sublime Text

Extension types for geospatial data for use with 'Arrow'

Working with the outputs of sourmash in R

Fast FASTQ sample demultiplexing in Rust.

A model-based visualization method for microbiome data

Custom firmware for the Xiaomi Thermometer LYWSD03MMC and Telink Flasher via USB to Serial converter

Custom firmware for the Xiaomi Thermometers and Telink Flasher