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Showing results

Molecular International Prognostic Scoring System IPSS-M for Myelodysplastic Syndromes

R 10 5 Updated Feb 5, 2023

Spatial alignment of single cell transcriptomic data.

Jupyter Notebook 297 57 Updated Jun 12, 2024
Python 4 1 Updated Dec 22, 2023

Contains hands-on example code for [O'reilly book "Deep Learning At Scale"](https://www.oreilly.com/library/view/deep-learning-at/9781098145279/).

Jupyter Notebook 26 4 Updated Jun 15, 2024

Toolkit for large-scale whole-slide image processing.

Python 221 35 Updated May 22, 2025

Official repository for the Boltz-1 biomolecular interaction model

Python 1,856 301 Updated May 14, 2025

Integrate Any Omics: Towards genome-wide data integration for patient stratification

Jupyter Notebook 52 12 Updated May 19, 2025

Geometric GNN Dojo provides unified implementations and experiments to explore the design space of Geometric Graph Neural Networks (ICML 2023)

Jupyter Notebook 499 46 Updated May 22, 2024
Jupyter Notebook 13 19 Updated Oct 2, 2023

This series will take you on a journey from the fundamentals of NLP and Computer Vision to the cutting edge of Vision-Language Models.

Jupyter Notebook 1,072 98 Updated Jan 23, 2025

Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many other features.

Python 47 2 Updated May 20, 2025

Spatial Single Cell Analysis in Python

Python 489 96 Updated May 20, 2025

Python tool for converting files and office documents to Markdown.

Python 57,786 2,960 Updated May 21, 2025

GrAIdient is a deep learning framework that aims at challenging the way we train and run models.

Swift 82 2 Updated Sep 3, 2024

Datacamp class for master student - 1 week

Jupyter Notebook 45 160 Updated Dec 20, 2024

Gene Ontology Associated Term Similarities.

Python 1 Updated Dec 16, 2024
Jupyter Notebook 6 1 Updated Mar 4, 2025

AlphaFold 3 inference pipeline.

Python 6,496 820 Updated May 22, 2025

Hackaton Reproductibilité - L'objectif est de construire un pipeline d'analyse de données omiques pour reproduire les figures d'un papier.

Nextflow 4 Updated Dec 9, 2024