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Issues list

Support --prefix option for output filenames?
#19 by tseemann was closed May 4, 2015
3
unclear input requirement
#4 by dbrami was closed Dec 14, 2014
1
Building the code appears broken on OS X
#5 by lgautier was closed Nov 19, 2014
Building the code broken on OS X (part II)
#7 by lgautier was closed Dec 14, 2014
3
Error occurs when assembling contigs for k = 101
#8 by bfoster-lbl was closed Nov 17, 2014
2
Confusion between "-t threads" and $OMP_NUM_THREADS
#10 by tseemann was closed Dec 14, 2014
1
instabilty in head
#11 by ghost was closed May 4, 2015
3
assembly restart clarification
#12 by bfoster-lbl was closed Jan 29, 2015
8
SuccinctDBG error in v0.2.0
#14 by miasteinberg was closed Jan 30, 2015
2
Distribution of indegree and outdegree for contigs
#15 by sebhtml was closed Feb 3, 2015
2
setting memory
#16 by bfoster-lbl was closed Feb 20, 2015
2
Any information about k-mer coverage in "log" ?
#17 by tseemann was closed Mar 17, 2015
6
Getting started
#1 by accopeland was closed Oct 12, 2014
3
"tmp" folder is not deleted at completion
#18 by tseemann was closed Jun 25, 2015
4
Access to the assembly graph? feature
#20 by tseemann was closed Nov 20, 2015
7
Using long reads in MEGAHIT
#21 by shaman-narayanasamy was closed May 4, 2015
4
Support for option like "--k-only"
#23 by tseemann was closed Jun 21, 2015
2
Incorporating paired end information in assemblies enhancement
#24 by shaman-narayanasamy was closed Jun 25, 2015
7
Insufficient memory warning
#27 by shaman-narayanasamy was closed Mar 12, 2015
3
Memory Setting Error
#28 by jrherr was closed Mar 13, 2015
4
Question about building SdBG of next k.
#29 by jiarong was closed Jun 18, 2015
1
Command line defaults in megahit - maybe $ENV variables?
#30 by tseemann was closed Jun 20, 2015
5
Overwrite output folder
#32 by shaman-narayanasamy was closed Mar 25, 2015
2
Broken backward compatibility with -o option
#33 by tseemann was closed Jun 14, 2015
3
Stuck with exit code 1 for a while please help
#348 by Sabrin2020 was closed Jan 23, 2023
2
ProTip! Updated in the last three days: updated:>2025-01-11.