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Commits on Feb 10, 2020

• Fix unsigned comparison warnings

  rakarnik

  authored
  830e26f

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Commits on Jan 2, 2020

• Fix getEdges() Method of the Network Class

  Show description for 0204209
  evolvedmicrobe

  committed
  0204209

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Commits on Jun 25, 2019

• revert to R for matrix multiplication

  andrewwbutler

  committed
  a118b0d

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Commits on Mar 18, 2019

• fix for runtime crash for integration

  andrewwbutler

  committed
  5e0cd23

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Commits on Mar 13, 2019

• Changes to Parenting to not error without a parent environment

  

  Paul Hoffman

  committed
  d98a4b9

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Commits on Mar 4, 2019

• devtools::document() changed this

  ChristophH

  committed
  a714f67

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Commits on Jan 30, 2019

• pass arguments to leidenalg in python, check running on seurat object satijalab#1060

  TomKellyGenetics

  committed
  537c128

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Commits on Dec 18, 2018

• fix for runtime crash with some compiled fxns

  andrewwbutler

  committed
  fb13cf4

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Commits on Dec 9, 2018

• preserve cell names when storing nn matrix

  andrewwbutler

  committed
  5618e8c

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Commits on Dec 3, 2018

• Enhancement to FetchData

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  Paul Hoffman

  committed
  9e64469

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Commits on Nov 29, 2018

• add missing tests for data_manipulation code

  andrewwbutler

  committed
  0897080

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Commits on Nov 9, 2018

• rename VizDimReduction to VizDimLoadings

  andrewwbutler

  committed
  e18967b

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Commits on Oct 30, 2018

• add new integration method

  andrewwbutler

  committed
  4f7a772

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Commits on Oct 2, 2018

• remove unused cpp function

  andrewwbutler

  committed
  943b282

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Commits on Oct 1, 2018

• remove unused functions from data_manipulation, update tests

  andrewwbutler

  committed
  7a899b7

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Commits on Aug 14, 2018

• slim ModularityOptimizer verbosity, default n.start set to 10

  andrewwbutler

  committed
  d5accac

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Commits on Aug 3, 2018

• move FindVariableFeatures new into FindVariableFeatures, fix progress bar for variance calculation

  andrewwbutler

  committed
  be5f140

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Commits on Jul 29, 2018

• More premature optimization: use NumericVector instead of Eigen::Vector

  ChristophH

  committed
  f90cbcb

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• Premature optimization: add SparseRowVar2 for when you already know the mean

  ChristophH

  committed
  0ef70cb

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• Add progress bar to SparseRowVarStd

  ChristophH

  committed
  b215b39

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• Add FindVariableFeaturesNew and corresponding C function SparseRowVarStd

  ChristophH

  committed
  052a4cd

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Commits on Jul 28, 2018

• Remove SparseRowMean and RowMean; use rowMean from Matrix and base package instead, it's faster

  ChristophH

  committed
  799c58e

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• Added preprocessing Rcpp functions, fixed UpdateSeuratObject bug

  

  Rahul Satija

  committed
  297a718

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Commits on Jul 18, 2018

• Add RowVar and RowSumOfSquares Rcpp functions for standard R matrices

  ChristophH

  committed
  5ae40b7

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Commits on Jul 12, 2018

• update docs/NEWS

  andrewwbutler

  committed
  e56deb4

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Commits on Jul 11, 2018

• Reduce Memory Usage in Standardize Function

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  evolvedmicrobe

  committed
  3c7f536

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Commits on Jul 9, 2018

• Remove Java Dependency

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  evolvedmicrobe

  committed
  80b327f

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Commits on Jun 22, 2018

• Remove All PKG_LIBS Flags

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  evolvedmicrobe

  committed
  93b856f

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Commits on Jun 11, 2018

• add back in fortran link for CRAN

  andrewwbutler

  committed
  ab52a6a

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Commits on May 25, 2018

• Use scaler runif

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  evolvedmicrobe

  committed
  ab62e7d

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• coeffRef(it.row(), it.col()) -> it.valueRef()

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  evolvedmicrobe

  committed
  be7b475

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Commits on May 9, 2018

• Remove reference to missing directory

  Show description for 1b01f5c
  evolvedmicrobe

  committed
  1b01f5c

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• Remove FLIBS from PKG_LIBS

  Show description for 0761434
  evolvedmicrobe

  committed
  0761434

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Commits on Mar 21, 2018

• remove now unnecessary parameter (nn_large)

  andrewwbutler

  committed
  2958eef

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Commits on Feb 21, 2018

• better way of removing zeros

  andrewwbutler

  committed
  8bc9e9c

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