an organelle emulator written in pygame + puredata

A end-to-end scRNA-seq analysis pipeline for cross-group comparison

CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.

A conda-forge distribution.

an algorithm for identifying multi-scale broad peaks from ChIP-seq data

A R package for integrated scRNA-seq data analysis using the RPCI algorithm

Community-provided extensions to Seurat

py4pd allows write PureData objects using Python. The main goal is to allow easy IA, Scores, Graphics, and bring to Pd data types as array, np.arrays, list, dict, and others.

Allows adding extensions from chrome web store on ungoogled-chromium. Also adds semi-automatic extension updating.

R package to evaluate the reproducibility of Hi-C data

Visualization and analysis software for Hi-C data -

A collection of tools for Hi-C data analysis

R functions for very fast eigenvector calculation

Educational materials for learning WDL

Estimating and predicting HiC library resolution

tools in python for HiChIP pipeline

A fast and efficient tool for converting chromatin interaction data between genome assemblies

Audio plugin host

Software modular synth

Nextflow workflow for basic HiC data processing

Cromwell/WDL wrapper for Python

A compilation of abstractions and instruments compatible with Pure Data vanilla.

Multi-platform open-source set of audio and modulation tools that focus on synthesis, live electronic music, interconnection, probability, unique sounds, and intuitive interfacing built by Akunull …

Pure Data as a plugin, with a new GUI

Build-your-own guitar distortion!

Library combining some HTS stuff, core wiggle stuff, Jim Kent's libary.

Generate IGV style locus tracks from bigWig files in R