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  1. jvarkit jvarkit Public

    Forked from lindenb/jvarkit

    Java utilities for Bioinformatics

    Java

  2. An-Introduction-To-Applied-Bioinformatics An-Introduction-To-Applied-Bioinformatics Public

    Forked from applied-bioinformatics/An-Introduction-To-Applied-Bioinformatics

    Interactive lessons in bioinformatics.

    Python

  3. awesome-single-cell awesome-single-cell Public

    Forked from seandavi/awesome-single-cell

    List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  4. bioinformatics bioinformatics Public

    Forked from ossu/bioinformatics

    🔬 Path to a free self-taught education in Bioinformatics!

  5. pandora pandora Public

    Forked from iqbal-lab-org/pandora

    Pan-genome inference and genotyping with long noisy or short accurate reads

    C++

  6. OpenMS OpenMS Public

    Forked from OpenMS/OpenMS

    The codebase of the OpenMS project

    C++

Repositories

Showing 10 of 46 repositories
  • bioinfokit Public Forked from reneshbedre/bioinfokit

    Bioinformatics data analysis and visualization toolkit

    x-bioinformatics/bioinfokit’s past year of commit activity
    Python 0 MIT 75 0 0 Updated May 21, 2021
  • pbsv Public Forked from PacificBiosciences/pbsv

    pbsv - PacBio structural variant (SV) calling and analysis tools

    x-bioinformatics/pbsv’s past year of commit activity
    0 BSD-3-Clause-Clear 24 0 0 Updated Apr 19, 2021
  • cuteSV Public Forked from tjiangHIT/cuteSV

    Long read based human genomic structural variation detection with cuteSV

    x-bioinformatics/cuteSV’s past year of commit activity
    Python 0 MIT 38 0 0 Updated Apr 17, 2021
  • slivar Public Forked from brentp/slivar

    variant expressions, annotation, and filtering for great good.

    x-bioinformatics/slivar’s past year of commit activity
    Nim 0 MIT 23 0 0 Updated Apr 9, 2021
  • PLAMS Public Forked from SCM-NV/PLAMS

    Python Library for Automating Molecular Simulations

    x-bioinformatics/PLAMS’s past year of commit activity
    Python 0 25 0 0 Updated Apr 6, 2021
  • bwa Public Forked from lh3/bwa

    Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

    x-bioinformatics/bwa’s past year of commit activity
    C 0 GPL-3.0 561 0 0 Updated Mar 28, 2021
  • pynamd Public Forked from radakb/pynamd

    Python Tools for NAMD

    x-bioinformatics/pynamd’s past year of commit activity
    Python 0 MIT 10 0 0 Updated Mar 21, 2021
  • sambamba Public Forked from biod/sambamba

    Tools for working with SAM/BAM data

    x-bioinformatics/sambamba’s past year of commit activity
    D 0 GPL-2.0 107 0 0 Updated Mar 11, 2021
  • vcflib Public Forked from vcflib/vcflib

    C++ library and cmdline tools for parsing and manipulating VCF files

    x-bioinformatics/vcflib’s past year of commit activity
    C++ 0 MIT 224 0 0 Updated Feb 17, 2021
  • pytim Public Forked from Marcello-Sega/pytim

    a python package for the interfacial analysis of molecular simulations

    x-bioinformatics/pytim’s past year of commit activity
    Python 0 GPL-3.0 35 0 0 Updated Jan 12, 2021
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