Respository for Open-Science modular microscope system.

Analysis scripts for the network analyses of the Flywire connectome. Publication: "Network Statistics of the Whole-Brain Connectome of Drosophila"

A free, open source, multi-platform SQLite database manager.

Label Studio is a multi-type data labeling and annotation tool with standardized output format

DotDotGoose is a free, open source tool to assist with manually counting objects in images

TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.

Generate high-quality triangulated and polygonal art from images.

Color palette package in R inspired by works at the Metropolitan Museum of Art in New York

🎨 Diagram as Code for prototyping cloud system architectures

Python Image Sequence: Load video and sequential images in many formats with a simple, consistent interface.

Tutorial material on the scientific Python ecosystem

Models and examples built with TensorFlow

Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans

Here we present a mathematical model that estimates the behaviour of individual Drosophila in temperature gradients. The model takes the spatial dimension and temperature difference of the gradient…

⚡ A Fast, Extensible Progress Bar for Python and CLI

OctoPrint is the snappy web interface for your 3D printer!