[FIX 🐊] new bb moments

zhoukegui · Oct 20, 2022 · 50f86d1 · 50f86d1
1 parent 6ea0eae
commit 50f86d1
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Showing 6 changed files with 8 additions and 5 deletions.
diff --git a/enigmatoolbox/__pycache__/_version.cpython-37.pyc b/enigmatoolbox/__pycache__/_version.cpython-37.pyc
diff --git a/enigmatoolbox/__pycache__/_version.cpython-38.pyc b/enigmatoolbox/__pycache__/_version.cpython-38.pyc
diff --git a/matlab/scripts/histology/bb_gradient_plot.m b/matlab/scripts/histology/bb_gradient_plot.m
@@ -41,7 +41,7 @@ function bb_gradient_plot(data, varargin)
 in = p.Results;
 
 % Load gradient
-g = dlmread(['bb_gradient_' parcellation '.csv']);
+g = dlmread(['bb_gradient_' in.parcellation '.csv']);
 
 % Define number of bins
 numbin = 5;

diff --git a/matlab/scripts/histology/bb_moments_raincloud.m b/matlab/scripts/histology/bb_moments_raincloud.m
@@ -28,6 +28,9 @@ function bb_moments_raincloud(region_idx, parcellation, title)
 
 % Load BigBrain statistical moments (mean, skewness) 
 bb_moments = dlmread(['bb_moments_' parcellation '.csv']);
+bb_moments = bb_moments([2 4], :);
+bb_moments(1,:) = rescale(bb_moments(1,:), -1, 1);
+bb_moments(2,:) = rescale(bb_moments(2,:), -1, 1);
 
 % Moments colors
 spec = [158,1,66; 102,194,165]/255;

diff --git a/matlab/scripts/surface_viewer/plot_cortical.m b/matlab/scripts/surface_viewer/plot_cortical.m
@@ -110,10 +110,10 @@
 set(dcm_obj, 'UpdateFcn', @SurfStatDataCursor, 'DisplayStyle', 'window');
 
 %% set colorbar range 
-colorbar_range(in.color_range)
+colorbar_range(in.color_range);
 
 %% set colormaps 
-enigma_colormap(in.cmap)
+enigma_colormap(in.cmap);
 
 return
 end
diff --git a/matlab/scripts/surface_viewer/plot_subcortical.m b/matlab/scripts/surface_viewer/plot_subcortical.m
@@ -136,10 +136,10 @@
 set(dcm_obj,'UpdateFcn',@SurfStatDataCursor,'DisplayStyle','window');
 
 %% set colorbar range 
-colorbar_range(in.color_range)
+colorbar_range(in.color_range);
 
 %% set colormaps 
-enigma_colormap(in.cmap)
+enigma_colormap(in.cmap);
 
 return
 end