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@bm-hackathon-23

Hackathon 2023

Brain/MINDS Data Portal Hackathon 2023

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  1. sub-region-mri-segmentation sub-region-mri-segmentation Public

    MRI sub-region segmentation using SAM and Ants segmentation methods

    Jupyter Notebook 1

  2. tracto-preview tracto-preview Public

    Improving data portal's tractography preview

  3. NA216-Networks NA216-Networks Public

    Repo to share code for processing NA216 networks with different tools

    Jupyter Notebook

  4. McPherson-talk-slides McPherson-talk-slides Public

    Slides from the morning lecture (8-26) from Brent McPherson

  5. X X Public

    Forked from xtk/X

    fork of The X Toolkit

    JavaScript

  6. Nissl-Ribbon-Annotator Nissl-Ribbon-Annotator Public

    An annotator for Nissl-stained cortical ribbons provided by the Brain/MIND project. https://dataportal.brainminds.jp/

    Python

Repositories

Showing 10 of 12 repositories
  • NA216-BIDS Public

    Scripts to BIDS-ify the existing NA216 datalad dataset

    bm-hackathon-23/NA216-BIDS’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated Oct 16, 2023
  • marmoset-brain-dashboard Public

    Dashboard to display information of individual animals

    bm-hackathon-23/marmoset-brain-dashboard’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 8, 2023
  • SimpleDeformationSimulation Public

    A simple simulation for deformation using pick and drag

    bm-hackathon-23/SimpleDeformationSimulation’s past year of commit activity
    JavaScript 0 0 0 0 Updated Sep 1, 2023
  • gifti_surface_transformation Public

    Code to apply a set of linear and non-linear transformations to gifti data.

    bm-hackathon-23/gifti_surface_transformation’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Aug 31, 2023
  • Nissl-Ribbon-Annotator Public

    An annotator for Nissl-stained cortical ribbons provided by the Brain/MIND project. https://dataportal.brainminds.jp/

    bm-hackathon-23/Nissl-Ribbon-Annotator’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Aug 30, 2023
  • sub-region-mri-segmentation Public

    MRI sub-region segmentation using SAM and Ants segmentation methods

    bm-hackathon-23/sub-region-mri-segmentation’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Aug 30, 2023
  • GLI-Profile-Transformer Public

    A transformer-based architecture prototype for discriminating between neighbouring segments of the Nissl-stained cortical ribbon.

    bm-hackathon-23/GLI-Profile-Transformer’s past year of commit activity
    0 0 0 0 Updated Aug 30, 2023
  • tracer_data_investigation Public

    An investigation into the tissuecyte anterograde tracer study data on the Brain/MINDS Data Portal

    bm-hackathon-23/tracer_data_investigation’s past year of commit activity
    0 0 0 0 Updated Aug 30, 2023
  • tracto-preview Public

    Improving data portal's tractography preview

    bm-hackathon-23/tracto-preview’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Aug 28, 2023
  • X Public Forked from xtk/X

    fork of The X Toolkit

    bm-hackathon-23/X’s past year of commit activity
    JavaScript 0 278 0 0 Updated Aug 27, 2023
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