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dkoes committed Oct 27, 2016
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7 changes: 6 additions & 1 deletion rdconf.py
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import os, gzip

'''Given a smiles file, generate 3D conformers in output sdf.
Energy minimizes and filters conformers to meet energy window and rms constraints.'''
Energy minimizes and filters conformers to meet energy window and rms constraints.
Some time ago I compared this to alternative conformer generators and
it was quite competitive (especially after RDKit's UFF implementation
added OOP terms).
'''

#convert smiles to sdf
def getRMS(mol, c1,c2):
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