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Commits on Sep 25, 2018

• t/*: remove "use lib '.'" and t/lib/Error.pm

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  carandraug

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Commits on Sep 12, 2018

• Bio::Align::Graphics: move into its own distribution and drop dependency on GD

  carandraug

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Commits on Feb 16, 2016

• add tests for Issue bioperl#137

  hyphaltip

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Commits on Mar 29, 2014

• spellink

  

  Chris Fields

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Commits on Feb 19, 2014

• Checked that all testable formats are tested

  fangly

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Commits on Nov 23, 2013

• Bio/SimpleAlign.pm: Fixed a TODO, allowed the use of mask characters

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  fjossandon

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Commits on Mar 28, 2013

• Merge branch 'master' of github.com:bioperl/bioperl-live

  bosborne

  committed
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• Add dna_to_aa_aln method and tests

  bosborne

  committed
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• tests for inheritance should belong on the child class, not the parent class

  carandraug

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Commits on Dec 1, 2011

• fix up phylip output to get tests passing; this needs to be tested with longer data

  

  Chris Fields

  committed
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• use Test::Differences::eq_or_diff (via Test::Most) to show differences; do we really need to match input exactly?

  

  Chris Fields

  committed
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Commits on Oct 24, 2011

• correct test count

  

  Chris Fields

  committed
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Commits on Oct 11, 2011

• Added select_noncont_by_name method to Bio::SimpleAlign.

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  DaveMessina

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Commits on Jun 20, 2011

• Tests for Bio::Simple::Align::consensus_conservation()

  chadadavis

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Commits on May 9, 2011

• strip out -w flag (see perllexwarn as to why setting this is not a good thing); also refs #3215

  

  Chris Fields

  committed
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Commits on Aug 3, 2010

• [bug 2725] some updates to tests so they actually test accurately (they still pass!)

  

  Chris Fields

  committed
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Commits on Jun 5, 2010

• added test requirement/skip for GD so no longer errors out; now using Bio::Root::Test.

  DaveMessina

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Commits on May 27, 2010

• move test file to proper namespace

  

  Chris Fields

  committed
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Commits on May 20, 2010

• remove debugging

  

  Chris Fields

  committed
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Commits on May 13, 2010

• fix coordinate logic error, patch courtesy Ha X. Dang

  

  Chris Fields

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Commits on Jan 25, 2010

• change NA to -1

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  cjfields

  committed
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• tests for bug 2901

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  cjfields

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Commits on Nov 18, 2009

• Improvement of Bio::SimpleAlign::overall_percentage_identity

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  fangly

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Commits on Sep 16, 2009

• move bugzilla tests to relevant test files, data to t/data, and remove

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  cjfields

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• fix mask_columns, move tests over to SimpleAlign.t (these probably will be split out again at a later point once SimpleAlign is cleaned up)

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  cjfields

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Commits on Sep 15, 2009

• a TODO test case for bug 2842

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  cjfields

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Commits on Sep 7, 2009

• num_*, not no_*

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  cjfields

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Commits on Jul 6, 2009

• merge yapc10hackathon branch into trunk

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  rbuels

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Commits on Jun 10, 2009

• deprecate no_sequences/no_residues in main trunk (we can switch the version to 1.7 if deemed necessary)

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  cjfields

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Commits on Mar 23, 2009

• Tests for bug#2793 patch from Jay Hannah/thanks

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  maj

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Commits on Dec 8, 2008

• BioperlTest -> Bio::Root::Test

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  sendu

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Commits on Dec 3, 2008

• reorganising tests by group (5: rest)

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  heikkil

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