hanjunlee21
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Juric-et-al-2024 Public
Computational codes for the reproduction of the major findings of Juric et al. 2024
Jupyter Notebook MIT License UpdatedDec 17, 2024 -
Lee-et-al-2023 Public
RB represses cohesin-dependent loop formation and safeguards E2F-independent transcription
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HiCShuffle Public
FASTQ Shuffling Tool For Sanity Check in Hi-C Differential Contact Analysis
Python MIT License UpdatedDec 8, 2023 -
StructuralSimilarity Public
Identification of dynamic changes in chromatin conformation is a fundamental task in genetics. In 2020, Galan et al. presented CHESS (Comparison of Hi-C Experiments using Structural Similarity), a …
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bedGraph2Cluster Public
MATLAB Function for the k-Means Clustering of ChIP-seq bedGraph Data
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run_matlab Public
Command Line MATLAB Function Caller with Automatic MATLAB Compiler Runtime (MCR) Installation
Python MIT License UpdatedAug 23, 2022 -
PanChIP Public
Pan-ChIP-seq Analysis of Peak Sets
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SeroHet Public
SeroHet is a MATLAB-based software to study signatures of interpatient seroprotein heterogeneity in cancer patients.