jlparkI
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AntPack Public
Tools for annotation, processing and ML for antibody sequences
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resp_protein_toolkit Public
Basic toolkit for common protein engineering tasks
Python UpdatedDec 17, 2024 -
xGPR Public
Efficient approximate Bayesian machine learning
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evodiff_ft Public
Forked from microsoft/evodiffFine-tuning of evodiff with LoRA
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uncertaintyAwareDeepLearn Public
A PyTorch class that implements an approximate Gaussian process as the last layer of a neural network
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categorical_mixture Public
Fast, scalable clustering with a simple generative model
Python MIT License UpdatedJun 10, 2024 -
lora-pytorch-bnet-adapted Public
Forked from fkodom/lora-pytorchLoRA for PyTorch with some additional modules added
Python MIT License UpdatedMay 28, 2024 -
humanness_evaluation Public
Experiments associated with Parkinson et al. 2024 for humanness evaluation
Jupyter Notebook MIT License UpdatedMar 27, 2024 -
mix_T Public
Python (pip) package for fitting mixtures of Student's t-distributions using either maximum likelihood (EM) or Bayesian methodology (variational mean-field)
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benchmarking_xGPR Public
The code needed to reproduce the experiments associated with Parkinson et al. 2023 for the xGPR library