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Issues list

generate compressed vcf outputs enhancement Improvement for existing functionality
#243 opened Nov 4, 2022 by ramprasadn
@asp8200
19
manta path error bug Something isn't working
#480 opened Jan 16, 2024 by egenomics
14
Error_during_installation bug Something isn't working
#537 opened Apr 1, 2024 by vishramt7
10
Add more entry points to the workflow Effort high enhancement Improvement for existing functionality Impact high Priority medium
#261 opened Nov 29, 2022 by ramprasadn Release 1.3.0
7
Test+Docker profile fails: "The TensorFlow library was compiled to use AVX instructions, but these aren't available on your machine." bug Something isn't working
#590 opened Aug 12, 2024 by sitems
5
https://ai.marrvel.org / how to integrate to Scout and our analysis?
#560 opened May 27, 2024 by fulyataylan
5
SMNCOPYNUMBERCALLER ZeroDivisionError: float division by zero bug Something isn't working
#447 opened Nov 21, 2023 by yunhua1031
4
mosdepth error on dev branch bug Something isn't working
#626 opened Oct 7, 2024 by fa2k
3
Mismatch with new DNAScope ML model format bug Something isn't working
#568 opened Jun 13, 2024 by Jakob37
3
Option to publish GVCFs enhancement Improvement for existing functionality
#602 opened Aug 20, 2024 by sitems
2
Update CADD to version 1.7
#513 opened Feb 6, 2024 by jemten Release 1.3.0
2
Order of samples in family SNV and SV VCFs is different Effort low
#650 opened Nov 30, 2024 by sitems
1
gnomAD v4.1 SV database contains mix of SV and CNV - svdb problem bug Something isn't working
#615 opened Sep 20, 2024 by fa2k
1
Split deepvariant pipeline enhancement Improvement for existing functionality
#614 opened Sep 20, 2024 by fa2k
1
Help with figuring out if error is pipeline or HPC related bug Something isn't working
#612 opened Sep 18, 2024 by hrydbeck
1
Allow multiple unrelated cases/families in samplesheet.csv enhancement Improvement for existing functionality
#604 opened Aug 22, 2024 by sitems
1
filter_vep broken with hg38 bug Something isn't working
#599 opened Aug 15, 2024 by fellen31
1
Test+Docker profile fails: "ValueError: call_variants_outputs did not pass sanity check." bug Something isn't working
#592 opened Aug 12, 2024 by sitems
1
somalier (sample control + ancestry) enhancement Improvement for existing functionality
#446 opened Nov 15, 2023 by egenomics
@Lucpen
1
Wrong memory qualifier in postprocessgermlinecnvcalls bug Something isn't working
#441 opened Nov 8, 2023 by Jakob37
@ramprasadn
1
DeepMind AlphaMissense Effort low enhancement Improvement for existing functionality on hold Not planned yet or needs refinement
#427 opened Sep 20, 2023 by dnil
1
WisecondorX for aneuploidy and gender detection enhancement Improvement for existing functionality
#198 opened Aug 3, 2022 by kvn95ss
1
PIPELINE: write tests for local modules + subworkflows enhancement Improvement for existing functionality
#84 opened Jan 19, 2022 by projectoriented
1
Mosdepth coverage report of WES regions
#645 opened Nov 10, 2024 by sitems
Bigtools enhancement Improvement for existing functionality
#564 opened Jun 8, 2024 by ramprasadn
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