A simple example of Bayesian probability using lizard flipping. The lizard flipping was inspired by Luke Harmon's book on phylogenetic comparative methods: https://lukejharmon.github.io/pcm

Setting up the Python environment

To setup a local Python virtual environment that allows you to open the iPython notebooks using JupyterLab, run the setup-python-env.sh Bash script:

bash setup-python-env.sh

After that script finishes, there will be a pyenv directory that contains the local Python environment with all of the requirements needed to run the iPython notebooks with JupyterLab. To do so, first activate the Python environment:

source pyenv/bin/activate

and then fire up JupyterLab:

jupyter-lab

License

This work is licensed under a Creative Commons Attribution 4.0 International License.