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Achievements

Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

Achievements

Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

Organizations

@ga4gh @BD2KGenomics @UCSC-MedBook

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  • notebooks Public

    Misc tooling for my personal jupyter sandbox

    Jupyter Notebook Updated Jul 6, 2023

  • hello-fhir Public

    Sample FHIR files and code to open and explore

    MIT License Updated Aug 4, 2020

  • kubeflow Public

    Various bits to spin up and interact with kubeflow

    Makefile Updated Dec 30, 2019

  • jupyter Public

    Tooling to run jupyter on a shared server and scale via k8s

    Python 1 1 Updated Dec 23, 2019

  • kubernetes Public

    Various snippets and tooling to use a kubernetes cluster

    Makefile 4 4 Updated Nov 26, 2019

  • variant2vec Public

    Jupyter Notebook 2 Apache License 2.0 Updated Oct 8, 2019

  • pancan-gtex Public

    Ingest, classify and explain pancan-gtex via keras and tensorflow

    Jupyter Notebook 7 Apache License 2.0 Updated Jun 22, 2019

  • pubMunch Public

    Forked from maximilianh/pubMunch

    various tools to download, convert and process the full text of scientific articles

    Python Updated Mar 27, 2019

  • igene Public

    I gene therefor i am

    JavaScript Updated Mar 13, 2019

  • tumornormal Public

    Classifying TCGA+TARGET+GTEX Gene Expression Data

    Jupyter Notebook 7 4 Apache License 2.0 Updated Mar 3, 2019

  • tabula-muris Public

    Ingest, classify and explain single cell RNA-Seq mouse data

    Jupyter Notebook Updated Nov 21, 2018

  • brca-exchange Public

    Forked from BRCAChallenge/brca-exchange

    Overall management and deployment of the BRCA Exchange web portal and pipeline scripts

    JavaScript Updated Aug 27, 2018

  • bme230b Public

    Jupyter Notebook Apache License 2.0 Updated Jul 6, 2018

  • cgtd Public

    Forked from cancergenetrust/cgtd

    Decentralized distributed database of genomic and clinical data.

    Python Apache License 2.0 Updated Jun 14, 2018

  • wisdom Public

    Snippets for Athena/Wisdom analysis tooling

    Jupyter Notebook Apache License 2.0 Updated Apr 18, 2018

  • search-jupyter Public

    Search un-structured and semi-structured/tagged data in jupyter notebooks

    JavaScript Apache License 2.0 Updated Apr 18, 2018

  • gcn Public

    Forked from tkipf/gcn

    Implementation of Graph Convolutional Networks in TensorFlow

    Python MIT License Updated Dec 20, 2017

  • kluster Public

    Experiments in kmer clustering

    Jupyter Notebook Apache License 2.0 Updated Nov 11, 2017

  • rcurrie.github.io Public

    Software for the fun of it

    CSS Updated Sep 16, 2017

  • curate-cgt Public

    Curate CGT submission data into canonical formats

    Python Apache License 2.0 Updated Feb 23, 2017

  • dtmp Public

    Template Continious Integration Flask Project

    Python Apache License 2.0 Updated Feb 17, 2017

  • ga4gh Public

    Makefile 1 1 Updated Jan 25, 2017

  • icgc-cgt Public

    Scripts to ingest icgc public data and submit to a demo set of CGT servers

    Python Updated Dec 1, 2016

  • caffe Public

    Forked from BVLC/caffe

    Caffe: a Fast framework for neural networks

    C++ BSD 2-Clause "Simplified" License Updated May 29, 2014

  • longink Public

    Offline hacker news reader

    JavaScript 3 Updated May 31, 2013

  • triptox Public

    HTML5 mobile application that calculates up to 3 routes and then shows sources of emissions on those routes based on an EPA database

    JavaScript Updated Sep 16, 2011